Bases2Fastq

note

Demultiplexes and converts Element AVITI base calls into FASTQ files.

https://docs.elembio.io/docs/bases2fastq/introduction/

File search patterns

bases2fastq/project:
  contents: SampleStats
  fn: '*_RunStats.json'
  num_lines: 100
bases2fastq/run:
  contents: SampleStats
  fn: RunStats.json
  num_lines: 100